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MathWorks Inc matlab psychophysics toolbox
Figure 2. Schematic software overview. The program consists of three components. The component patternGen (purple) generates arbitrary stimuli, consisting of a texture (bitmap file) and a rotation protocol (text file). It also adjusts the background illumination value to gain a specific absolute intensity set by the user in the GUI. The omr monitor (light blue) implements the communication with the camera, the head tracking and the user interface during an experiment. Images are acquired through the <t>MATLAB</t> image acquisition toolbox and are used by the tracking module to determine the animal’s head location. The live view is displayed in an on-screen GUI (arenaCtrl) in which the user can also adjust tracking parameters. The retrieved head position is used to recalculate the location of the stimulus pattern. The updated translation and rotation parameters are passed to the third component, omr arena (red), which presents the cylinder at the correct position on the four screens through SDL/OpenGL. doi:10.1371/journal.pone.0078058.g002
Matlab Psychophysics Toolbox, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Figure 2. Schematic software overview. The program consists of three components. The component patternGen (purple) generates arbitrary stimuli, consisting of a texture (bitmap file) and a rotation protocol (text file). It also adjusts the background illumination value to gain a specific absolute intensity set by the user in the GUI. The omr monitor (light blue) implements the communication with the camera, the head tracking and the user interface during an experiment. Images are acquired through the <t>MATLAB</t> image acquisition toolbox and are used by the tracking module to determine the animal’s head location. The live view is displayed in an on-screen GUI (arenaCtrl) in which the user can also adjust tracking parameters. The retrieved head position is used to recalculate the location of the stimulus pattern. The updated translation and rotation parameters are passed to the third component, omr arena (red), which presents the cylinder at the correct position on the four screens through SDL/OpenGL. doi:10.1371/journal.pone.0078058.g002
Matlab Mathworks, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Figure 2. Schematic software overview. The program consists of three components. The component patternGen (purple) generates arbitrary stimuli, consisting of a texture (bitmap file) and a rotation protocol (text file). It also adjusts the background illumination value to gain a specific absolute intensity set by the user in the GUI. The omr monitor (light blue) implements the communication with the camera, the head tracking and the user interface during an experiment. Images are acquired through the <t>MATLAB</t> image acquisition toolbox and are used by the tracking module to determine the animal’s head location. The live view is displayed in an on-screen GUI (arenaCtrl) in which the user can also adjust tracking parameters. The retrieved head position is used to recalculate the location of the stimulus pattern. The updated translation and rotation parameters are passed to the third component, omr arena (red), which presents the cylinder at the correct position on the four screens through SDL/OpenGL. doi:10.1371/journal.pone.0078058.g002
Matlab The Mathworks Inc, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Figure 2. Schematic software overview. The program consists of three components. The component patternGen (purple) generates arbitrary stimuli, consisting of a texture (bitmap file) and a rotation protocol (text file). It also adjusts the background illumination value to gain a specific absolute intensity set by the user in the GUI. The omr monitor (light blue) implements the communication with the camera, the head tracking and the user interface during an experiment. Images are acquired through the <t>MATLAB</t> image acquisition toolbox and are used by the tracking module to determine the animal’s head location. The live view is displayed in an on-screen GUI (arenaCtrl) in which the user can also adjust tracking parameters. The retrieved head position is used to recalculate the location of the stimulus pattern. The updated translation and rotation parameters are passed to the third component, omr arena (red), which presents the cylinder at the correct position on the four screens through SDL/OpenGL. doi:10.1371/journal.pone.0078058.g002
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Cambridge Research Systems visage stimulus generator
Figure 2. Schematic software overview. The program consists of three components. The component patternGen (purple) generates arbitrary stimuli, consisting of a texture (bitmap file) and a rotation protocol (text file). It also adjusts the background illumination value to gain a specific absolute intensity set by the user in the GUI. The omr monitor (light blue) implements the communication with the camera, the head tracking and the user interface during an experiment. Images are acquired through the <t>MATLAB</t> image acquisition toolbox and are used by the tracking module to determine the animal’s head location. The live view is displayed in an on-screen GUI (arenaCtrl) in which the user can also adjust tracking parameters. The retrieved head position is used to recalculate the location of the stimulus pattern. The updated translation and rotation parameters are passed to the third component, omr arena (red), which presents the cylinder at the correct position on the four screens through SDL/OpenGL. doi:10.1371/journal.pone.0078058.g002
Visage Stimulus Generator, supplied by Cambridge Research Systems, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Figure 2. Schematic software overview. The program consists of three components. The component patternGen (purple) generates arbitrary stimuli, consisting of a texture (bitmap file) and a rotation protocol (text file). It also adjusts the background illumination value to gain a specific absolute intensity set by the user in the GUI. The omr monitor (light blue) implements the communication with the camera, the head tracking and the user interface during an experiment. Images are acquired through the <t>MATLAB</t> image acquisition toolbox and are used by the tracking module to determine the animal’s head location. The live view is displayed in an on-screen GUI (arenaCtrl) in which the user can also adjust tracking parameters. The retrieved head position is used to recalculate the location of the stimulus pattern. The updated translation and rotation parameters are passed to the third component, omr arena (red), which presents the cylinder at the correct position on the four screens through SDL/OpenGL. doi:10.1371/journal.pone.0078058.g002
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MathWorks Inc psychophysics toolbox extensions on matlab
Figure 2. Schematic software overview. The program consists of three components. The component patternGen (purple) generates arbitrary stimuli, consisting of a texture (bitmap file) and a rotation protocol (text file). It also adjusts the background illumination value to gain a specific absolute intensity set by the user in the GUI. The omr monitor (light blue) implements the communication with the camera, the head tracking and the user interface during an experiment. Images are acquired through the <t>MATLAB</t> image acquisition toolbox and are used by the tracking module to determine the animal’s head location. The live view is displayed in an on-screen GUI (arenaCtrl) in which the user can also adjust tracking parameters. The retrieved head position is used to recalculate the location of the stimulus pattern. The updated translation and rotation parameters are passed to the third component, omr arena (red), which presents the cylinder at the correct position on the four screens through SDL/OpenGL. doi:10.1371/journal.pone.0078058.g002
Psychophysics Toolbox Extensions On Matlab, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Cambridge Research Systems stimulus generator (cambridge research systems)
Figure 2. Schematic software overview. The program consists of three components. The component patternGen (purple) generates arbitrary stimuli, consisting of a texture (bitmap file) and a rotation protocol (text file). It also adjusts the background illumination value to gain a specific absolute intensity set by the user in the GUI. The omr monitor (light blue) implements the communication with the camera, the head tracking and the user interface during an experiment. Images are acquired through the <t>MATLAB</t> image acquisition toolbox and are used by the tracking module to determine the animal’s head location. The live view is displayed in an on-screen GUI (arenaCtrl) in which the user can also adjust tracking parameters. The retrieved head position is used to recalculate the location of the stimulus pattern. The updated translation and rotation parameters are passed to the third component, omr arena (red), which presents the cylinder at the correct position on the four screens through SDL/OpenGL. doi:10.1371/journal.pone.0078058.g002
Stimulus Generator (Cambridge Research Systems), supplied by Cambridge Research Systems, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Figure 2. Schematic software overview. The program consists of three components. The component patternGen (purple) generates arbitrary stimuli, consisting of a texture (bitmap file) and a rotation protocol (text file). It also adjusts the background illumination value to gain a specific absolute intensity set by the user in the GUI. The omr monitor (light blue) implements the communication with the camera, the head tracking and the user interface during an experiment. Images are acquired through the MATLAB image acquisition toolbox and are used by the tracking module to determine the animal’s head location. The live view is displayed in an on-screen GUI (arenaCtrl) in which the user can also adjust tracking parameters. The retrieved head position is used to recalculate the location of the stimulus pattern. The updated translation and rotation parameters are passed to the third component, omr arena (red), which presents the cylinder at the correct position on the four screens through SDL/OpenGL. doi:10.1371/journal.pone.0078058.g002

Journal: PloS one

Article Title: OMR-arena: automated measurement and stimulation system to determine mouse visual thresholds based on optomotor responses.

doi: 10.1371/journal.pone.0078058

Figure Lengend Snippet: Figure 2. Schematic software overview. The program consists of three components. The component patternGen (purple) generates arbitrary stimuli, consisting of a texture (bitmap file) and a rotation protocol (text file). It also adjusts the background illumination value to gain a specific absolute intensity set by the user in the GUI. The omr monitor (light blue) implements the communication with the camera, the head tracking and the user interface during an experiment. Images are acquired through the MATLAB image acquisition toolbox and are used by the tracking module to determine the animal’s head location. The live view is displayed in an on-screen GUI (arenaCtrl) in which the user can also adjust tracking parameters. The retrieved head position is used to recalculate the location of the stimulus pattern. The updated translation and rotation parameters are passed to the third component, omr arena (red), which presents the cylinder at the correct position on the four screens through SDL/OpenGL. doi:10.1371/journal.pone.0078058.g002

Article Snippet: The software is able to present arbitrary stimuli on four displays simultaneously. (In contrast, the common MATLAB Psychophysics Toolbox [34], which we used in a previous version of the stimulation software [23], only fully supports two displays.)

Techniques: Software